Transcript: ENST00000566606.1 HSD11B2-003

Description

hydroxysteroid (11-beta) dehydrogenase 2 [Source:HGNC Symbol;Acc:5209]

Gene Synonyms

AME, AME1, HSD11K, HSD2, SDR9C3

Location

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 2207 variant alleles and maps to 126 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000326152.5	HSD11B2-001	1900	405aa	ENSP00000316786.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10837	P80365	NM_000196.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566606.1	HSD11B2-003	634	58aa	ENSP00000473429.1	Nonsense mediated decay		R4GN04	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000567684.2	HSD11B2-002	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569303.1	HSD11B2-004	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 634 bps, Translation length: 58 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000566606.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000421792 (version 3)