Transcript: ENST00000326152.5 HSD11B2-001

Description

hydroxysteroid (11-beta) dehydrogenase 2 [Source:HGNC Symbol;Acc:5209]

Gene Synonyms

AME, AME1, HSD11K, HSD2, SDR9C3

Location

About this transcript

This transcript has 5 exons, is annotated with 18 domains and features, is associated with 3227 variant alleles and maps to 315 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000326152.5	HSD11B2-001	1900	405aa	ENSP00000316786.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10837	P80365	NM_000196.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566606.1	HSD11B2-003	634	58aa	ENSP00000473429.1	Nonsense mediated decay		R4GN04	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000567684.2	HSD11B2-002	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569303.1	HSD11B2-004	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,900 bps, Translation length: 405 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P80365

CCDS

This transcript is a member of the Human CCDS set: CCDS10837

Version

ENST00000326152.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000268826 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.