Description
sphingosine kinase 1 [Source:HGNC Symbol;Acc:11240]
Gene Synonyms
SPHK, SPK
Location
Chromosome 17: 74,381,373-74,383,938 forward strand.
About this transcript
This transcript has 5 exons, is annotated with 10 domains and features, is associated with 1776 variant alleles and maps to 272 oligo probes.
Gene
This transcript is a product of gene ENSG00000176170.9 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000323374.4 | SPHK1-001 | 2138 | 470aa | ENSP00000313681.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11744 | K7EJ32 K7EMA4 Q53ZR5 Q9BTG7 Q9NYA1 | NM_182965.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000545180.1 | SPHK1-006 | 2238 | 384aa | ENSP00000440970.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45785 | K7EJ32 K7EMA4 Q53ZR5 Q9BTG7 Q9NYA1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000590959.1 | SPHK1-003 | 1851 | 398aa | ENSP00000468547.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS59297 | Q9BTG7 Q9NYA1 | NM_021972.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000592299.1 | SPHK1-002 | 1821 | 384aa | ENSP00000465726.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45785 | K7EJ32 K7EMA4 Q53ZR5 Q9BTG7 Q9NYA1 | NM_001142601.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000392496.3 | SPHK1-004 | 1779 | 384aa | ENSP00000376285.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45785 | K7EJ32 K7EMA4 Q53ZR5 Q9BTG7 Q9NYA1 | NM_001142602.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000588682.1 | SPHK1-009 | 858 | 152aa | ENSP00000466422.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJ32 K7EMA4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000590379.1 | SPHK1-010 | 588 | 111aa | ENSP00000465002.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJ32 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000591651.1 | SPHK1-008 | 541 | 5aa | ENSP00000468474.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000591762.1 | SPHK1-005 | 2502 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000587167.1 | SPHK1-011 | 456 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |