Transcript: ENST00000608796.1 SWI5-001

Description

SWI5 recombination repair homolog (yeast) [Source:HGNC Symbol;Acc:31412]

Gene Synonyms

C9orf119, SAE3, bA395P17.9

Location

Chromosome 9: 131,038,501-131,051,269 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 5964 variant alleles and maps to 276 oligo probes.

Gene

This transcript is a product of gene ENSG00000175854.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000320188.5	SWI5-201	980	235aa	ENSP00000316609.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43883	Q1ZZU3	NM_001040011.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419867.2	SWI5-005	1048	151aa	ENSP00000477295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000608796.1	SWI5-001	906	170aa	ENSP00000476650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418976.1	SWI5-002	763	130aa	ENSP00000411469.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3F2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372898.2	SWI5-003	699	145aa	ENSP00000361989.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000495313.1	SWI5-004	466	139aa	ENSP00000419719.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C5E9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 906 bps, Translation length: 170 residues

Version

ENST00000608796.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000054336 (version 3)

Annotation Attributes

RP supported TIS [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000608796.1 SWI5-001

Summary