Transcript: ENST00000515458.1 EIF4E1B-002

Description

eukaryotic translation initiation factor 4E family member 1B [Source:HGNC Symbol;Acc:33179]

Gene Synonyms

FLJ36951

Location

Chromosome 5: 176,057,956-176,073,642 forward strand.

About this transcript

This transcript has 6 exons, is associated with 7385 variant alleles and maps to 378 oligo probes.

Gene

This transcript is a product of gene ENSG00000175766.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318682.6	EIF4E1B-201	1974	242aa	ENSP00000323714.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47345	A6NMX2 D6RHE2	NM_001099408.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504597.1	EIF4E1B-001	1676	242aa	ENSP00000427633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47345	A6NMX2 D6RHE2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510660.1	EIF4E1B-003	581	90aa	ENSP00000421009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RHE2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505497.1	EIF4E1B-008	514	171aa	ENSP00000422420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000512734.1	EIF4E1B-007	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510473.1	EIF4E1B-005	533	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515458.1	EIF4E1B-002	2836	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000503895.1	EIF4E1B-006	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 2,836 bps,

Version

ENST00000515458.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372188 (version 1)

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Transcript: ENST00000515458.1 EIF4E1B-002

Summary