Transcript: ENST00000312419.3 POLD4-004

Description

polymerase (DNA-directed), delta 4, accessory subunit [Source:HGNC Symbol;Acc:14106]

Gene Synonyms

POLDS, p12

Location

Chromosome 11: 67,119,019-67,121,017 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 1025 variant alleles and maps to 368 oligo probes.

Gene

This transcript is a product of gene ENSG00000175482.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312419.3	POLD4-004	918	107aa	ENSP00000311368.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8158	Q9HCU8	NM_021173.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539074.1	POLD4-013	714	79aa	ENSP00000444780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58149	Q9HCU8	NM_001256870.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530584.1	POLD4-005	899	34aa	ENSP00000436361.1	Nonsense mediated decay		Q59G35 Q9BVB1	-	-
ENST00000531239.1	POLD4-010	584	28aa	ENSP00000433408.1	Nonsense mediated decay		E9PL15	-	-
ENST00000529704.1	POLD4-002	1486	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532830.1	POLD4-001	904	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534515.1	POLD4-003	1793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528087.1	POLD4-006	1701	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533429.1	POLD4-008	860	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525255.1	POLD4-007	822	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542982.1	POLD4-012	809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524743.1	POLD4-009	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529000.1	POLD4-011	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 918 bps, Translation length: 107 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HCU8

CCDS

This transcript is a member of the Human CCDS set: CCDS8158

Version

ENST00000312419.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000393336 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000312419.3 POLD4-004

Summary