Transcript: ENST00000477755.1 APITD1-002

Description

apoptosis-inducing, TAF9-like domain 1 [Source:HGNC Symbol;Acc:23163]

Gene Synonyms

CENP-S, CENPS, FAAP16, MHF1

Location

Chromosome 1: 10,490,840-10,502,391 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 5799 variant alleles and maps to 471 oligo probes.

Gene

This transcript is a product of gene ENSG00000175279.17 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000602787.1	APITD1-202	1469	164aa	ENSP00000473509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS114	Q8N2Z9	NM_198544.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602296.1	APITD1-201	1402	77aa	ENSP00000473401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53266	Q8N2Z9	NM_199006.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477755.1	APITD1-002	914	76aa	ENSP00000468629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ESB0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000309048.3	APITD1-001	896	138aa	ENSP00000308583.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS115	K7ESB0 Q8N2Z9	NM_199294.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462462.1	APITD1-003	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000602486.1	APITD1-005	312	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464507.1	APITD1-004	684	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 914 bps, Translation length: 76 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000477755.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000130800 (version 4)

Favourite species

All species

Recent locations

Transcript: ENST00000477755.1 APITD1-002

Summary