Transcript: ENST00000476357.1 C1orf127-002

Description

chromosome 1 open reading frame 127 [Source:HGNC Symbol;Acc:26730]

Gene Synonyms

FLJ37118

Location

Chromosome 1: 11,006,528-11,009,808 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1903 variant alleles and maps to 209 oligo probes.

Gene

This transcript is a product of gene ENSG00000175262.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377004.4	C1orf127-201	2761	823aa	ENSP00000366203.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53267	B7ZLG7 G8JLG8	NM_001170754.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377008.4	C1orf127-202	2707	656aa	ENSP00000366207.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N9H9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520253.1	C1orf127-004	2359	775aa	ENSP00000429704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000418570.2	C1orf127-001	2265	658aa	ENSP00000387816.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000468348.1	C1orf127-003	340	69aa	ENSP00000467607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000476357.1	C1orf127-002	2377	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,377 bps,

Version

ENST00000476357.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000005667 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000476357.1 C1orf127-002

Summary