Transcript: ENST00000376476.1 NPPA-002

Description

natriuretic peptide A [Source:HGNC Symbol;Acc:7939]

Gene Synonyms

ANF, ANP, ATFB6, CDD-ANF, PND

Location

Chromosome 1: 11,905,936-11,908,402 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features, is associated with 1552 variant alleles and maps to 237 oligo probes.

Gene

This transcript is a product of gene ENSG00000175206.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376480.3	NPPA-001	855	151aa	ENSP00000365663.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS139	B0ZBE8 P01160	NM_006172.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376476.1	NPPA-002	728	101aa	ENSP00000365659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0ZBE8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 728 bps, Translation length: 101 residues

Version

ENST00000376476.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs5065, that causes a stop codon to be lost in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-LWK, CSHL-HAPMAP:HAPMAP-ASW, ESP6500:African_American, CSHL-HAPMAP:HapMap-CEU, CSHL-HAPMAP:HAPMAP-GIH, ESP6500:European_American.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000006853 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000376476.1 NPPA-002

Summary