Transcript: ENST00000308768.5 KCTD13-005

Description

potassium channel tetramerization domain containing 13 [Source:HGNC Symbol;Acc:22234]

Gene Synonyms

BACURD1, FKSG86, PDIP1, POLDIP1, hBACURD1

Location

Chromosome 16: 29,916,333-29,937,530 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 9307 variant alleles and maps to 364 oligo probes.

Gene

This transcript is a product of gene ENSG00000174943.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000568000.1	KCTD13-001	2528	329aa	ENSP00000455785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10661	Q8WZ19	NM_178863.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561540.1	KCTD13-003	1773	209aa	ENSP00000458486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L108	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568995.1	KCTD13-009	601	140aa	ENSP00000454282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BM90	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000566413.1	KCTD13-004	264	81aa	ENSP00000460526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000566842.1	KCTD13-002	1860	120aa	ENSP00000459104.1	Nonsense mediated decay		I3L1U2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000308768.5	KCTD13-005	1685	329aa	ENSP00000311202.5	Nonsense mediated decay	CCDS10661	Q8WZ19	-	-
ENST00000568721.1	KCTD13-006	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563264.1	KCTD13-008	440	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563955.1	KCTD13-007	806	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,685 bps, Translation length: 329 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WZ19

CCDS

This transcript is a member of the Human CCDS set: CCDS10661

Version

ENST00000308768.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000435608 (version 1)

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Transcript: ENST00000308768.5 KCTD13-005

Summary