Transcript: ENST00000531822.1 AKIRIN1-007

Description

akirin 1 [Source:HGNC Symbol;Acc:25744]

Gene Synonyms

C1orf108, FLJ12666, RP11-781D11.2, STRF2

Location

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 6486 variant alleles and maps to 228 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000432648.3	AKIRIN1-001	2741	192aa	ENSP00000392678.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS433	Q9H9L7	NM_024595.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372984.4	AKIRIN1-005	1330	145aa	ENSP00000362075.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQP0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446189.2	AKIRIN1-004	1243	147aa	ENSP00000389866.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44113	Q9H9L7	NM_001136275.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531822.1	AKIRIN1-007	718	130aa	ENSP00000436372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 718 bps, Translation length: 130 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000531822.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000388645 (version 1)

Annotation Attributes

dotter confirmed [Definitions]