Transcript: ENST00000475972.1 IL20RB-003

Description

interleukin 20 receptor beta [Source:HGNC Symbol;Acc:6004]

Gene Synonyms

DIRS1, FNDC6, IL-20R2, MGC34923

Location

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 13117 variant alleles and maps to 335 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000329582.4	IL20RB-001	2047	311aa	ENSP00000328133.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3093	Q6UXL0	NM_144717.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000309741.5	IL20RB-201	1884	147aa	ENSP00000311979.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IYY5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469964.1	IL20RB-002	1887	49aa	ENSP00000418637.1	Nonsense mediated decay		F8WC67	-	-
ENST00000475972.1	IL20RB-003	1787	120aa	ENSP00000420725.1	Nonsense mediated decay		H7C5S5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000491483.1	IL20RB-004	956	55aa	ENSP00000417437.1	Nonsense mediated decay		F8WAV8	-	-
ENST00000484501.1	IL20RB-006	427	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 1,787 bps, Translation length: 120 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000475972.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000357282 (version 1)