Transcript: ENST00000308973.4 TLR10-001

Description

toll-like receptor 10 [Source:HGNC Symbol;Acc:15634]

Gene Synonyms

CD290

Location

Chromosome 4: 38,773,860-38,784,579 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 38 domains and features, is associated with 4879 variant alleles and maps to 425 oligo probes.

Gene

This transcript is a product of gene ENSG00000174123.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308973.4	TLR10-001	3958	811aa	ENSP00000308925.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3445	D6RHW6 Q9BXR5	NM_030956.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506111.1	TLR10-003	3462	811aa	ENSP00000421483.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3445	D6RHW6 Q9BXR5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361424.2	TLR10-201	3059	811aa	ENSP00000354459.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3445	D6RHW6 Q9BXR5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508334.1	TLR10-002	2616	811aa	ENSP00000424923.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3445	D6RHW6 Q9BXR5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502321.1	TLR10-004	676	94aa	ENSP00000427606.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RHW6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507953.1	TLR10-005	596	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 3,958 bps, Translation length: 811 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BXR5

CCDS

This transcript is a member of the Human CCDS set: CCDS3445

Version

ENST00000308973.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250430 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000308973.4 TLR10-001

Summary