Transcript: ENST00000542032.1 LEMD3-003

Description

LEM domain containing 3 [Source:HGNC Symbol;Acc:28887]

Gene Synonyms

MAN1

Location

Chromosome 12: 65,634,346-65,639,489 forward strand.

About this transcript

This transcript has 3 exons, is associated with 2152 variant alleles and maps to 134 oligo probes.

Gene

This transcript is a product of gene ENSG00000174106.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308330.2	LEMD3-001	4764	911aa	ENSP00000308369.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8972	B4DI45 Q9Y2U8	NM_014319.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541171.1	LEMD3-002	856	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000539442.1	LEMD3-005	932	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542032.1	LEMD3-003	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000545026.1	LEMD3-004	619	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544506.1	LEMD3-006	412	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 645 bps,

Version

ENST00000542032.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000401322 (version 1)

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Transcript: ENST00000542032.1 LEMD3-003

Summary