Transcript: ENST00000528106.2 RBM4B-005

Description

RNA binding motif protein 4B [Source:HGNC Symbol;Acc:28842]

Gene Synonyms

MGC10871, RBM30, RBM4L, ZCCHC15, ZCCHC21B, ZCRB3B

Location

Chromosome 11: 66,433,019-66,436,156 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1339 variant alleles and maps to 106 oligo probes.

Gene

This transcript is a product of gene ENSG00000173914.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000525754.1	RBM4B-002	2339	359aa	ENSP00000433071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8149	Q9BQ04	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000310046.4	RBM4B-001	1840	359aa	ENSP00000310471.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8149	Q9BQ04	NM_031492.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531036.2	RBM4B-003	1646	151aa	ENSP00000475784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQD5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524637.1	RBM4B-008	867	147aa	ENSP00000433113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM61	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531969.1	RBM4B-004	769	143aa	ENSP00000435239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66144	E9PLB0	NM_001286135.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528106.2	RBM4B-005	324	20aa	ENSP00000433601.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000529195.2	RBM4B-006	809	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534198.1	RBM4B-007	431	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 324 bps, Translation length: 20 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000528106.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000393855 (version 2)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000528106.2 RBM4B-005

Summary