Transcript: ENST00000525754.1 RBM4B-002

Description

RNA binding motif protein 4B [Source:HGNC Symbol;Acc:28842]

Gene Synonyms

MGC10871, RBM30, RBM4L, ZCCHC15, ZCCHC21B, ZCRB3B

Location

Chromosome 11: 66,432,469-66,445,219 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 18 domains and features, is associated with 5965 variant alleles and maps to 304 oligo probes.

Gene

This transcript is a product of gene ENSG00000173914.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000525754.1	RBM4B-002	2339	359aa	ENSP00000433071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8149	Q9BQ04	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000310046.4	RBM4B-001	1840	359aa	ENSP00000310471.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8149	Q9BQ04	NM_031492.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531036.2	RBM4B-003	1646	151aa	ENSP00000475784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQD5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524637.1	RBM4B-008	867	147aa	ENSP00000433113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM61	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531969.1	RBM4B-004	769	143aa	ENSP00000435239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66144	E9PLB0	NM_001286135.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528106.2	RBM4B-005	324	20aa	ENSP00000433601.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000529195.2	RBM4B-006	809	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534198.1	RBM4B-007	431	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,339 bps, Translation length: 359 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BQ04

CCDS

This transcript is a member of the Human CCDS set: CCDS8149

Version

ENST00000525754.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000393851 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000525754.1 RBM4B-002

Summary