Transcript: ENST00000310544.4 PHOSPHO1-001

Description

phosphatase, orphan 1 [Source:HGNC Symbol;Acc:16815]

Location

Chromosome 17: 47,300,724-47,307,890 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 3427 variant alleles and maps to 311 oligo probes.

Gene

This transcript is a product of gene ENSG00000173868.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000413580.1	PHOSPHO1-201	2173	292aa	ENSP00000406909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45726	D6RIT6 Q8TCT1	NM_178500.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000310544.4	PHOSPHO1-001	1816	267aa	ENSP00000311925.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11547	D6RHH9 I3L4N1 Q8TCT1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514112.1	PHOSPHO1-002	1587	292aa	ENSP00000427694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45726	D6RIT6 Q8TCT1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511066.1	PHOSPHO1-005	868	203aa	ENSP00000426095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RHH9 I3L4N1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503902.1	PHOSPHO1-006	837	166aa	ENSP00000424406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RB58	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512250.1	PHOSPHO1-003	733	111aa	ENSP00000427397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIT6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574638.1	PHOSPHO1-007	391	86aa	ENSP00000461392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4N1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,816 bps, Translation length: 267 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TCT1

CCDS

This transcript is a member of the Human CCDS set: CCDS11547

Version

ENST00000310544.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000364467 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000310544.4 PHOSPHO1-001

Summary