Transcript: ENST00000583803.1 MARCH10-006

Description

membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:26655]

Gene Synonyms

FLJ35757, MARCH-X, RNF190

Location

Chromosome 17: 60,865,868-60,884,001 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 9212 variant alleles and maps to 80 oligo probes.

Gene

This transcript is a product of gene ENSG00000173838.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311269.5	MARCH10-001	3090	808aa	ENSP00000311496.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11635	J3KTK3 Q8NA82	NM_152598.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544856.2	MARCH10-003	3338	799aa	ENSP00000443746.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1Q5 J3KTK3	NM_001288780.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583600.1	MARCH10-002	3214	846aa	ENSP00000463080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTK3 J3KTN9	NM_001288779.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456609.2	MARCH10-004	3057	808aa	ENSP00000416177.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11635	J3KTK3 Q8NA82	NM_001100875.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580520.1	MARCH10-005	2377	693aa	ENSP00000464220.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRH7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582568.1	MARCH10-008	718	164aa	ENSP00000463572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QLJ2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000583803.1	MARCH10-006	559	61aa	ENSP00000463029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTK3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000579620.1	MARCH10-010	243	64aa	ENSP00000463207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QKS0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582358.1	MARCH10-009	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000578346.1	MARCH10-007	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 559 bps, Translation length: 61 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000583803.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000445257 (version 1)

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Transcript: ENST00000583803.1 MARCH10-006

Summary