Transcript: ENST00000373671.3 AGFG1-002

Description

ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:5175]

Gene Synonyms

HRB, RAB, RIP

Location

Chromosome 2: 228,337,088-228,419,261 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 16 domains and features, is associated with 36989 variant alleles and maps to 355 oligo probes.

Gene

This transcript is a product of gene ENSG00000173744.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409979.2	AGFG1-003	2089	584aa	ENSP00000387282.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46533	-	NM_001135187.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000310078.8	AGFG1-001	8668	562aa	ENSP00000312059.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2467	P52594	NM_004504.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409315.1	AGFG1-004	2912	541aa	ENSP00000387154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZY2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409171.1	AGFG1-005	1783	560aa	ENSP00000387218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46534	P52594	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373671.3	AGFG1-002	1669	522aa	ENSP00000362775.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46535	P52594	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456594.1	AGFG1-006	1065	237aa	ENSP00000405429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J2I0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000458212.1	AGFG1-008	815	132aa	ENSP00000396469.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486932.1	AGFG1-007	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,669 bps, Translation length: 522 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P52594

CCDS

This transcript is a member of the Human CCDS set: CCDS46535

Version

ENST00000373671.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000331536 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000373671.3 AGFG1-002

Summary