Transcript: ENST00000356128.4 TRAPPC3L-002

Description

trafficking protein particle complex 3-like [Source:HGNC Symbol;Acc:21090]

Gene Synonyms

BET3L, FLJ11180, bA259P20.2

Location

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 7819 variant alleles and maps to 195 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368602.3	TRAPPC3L-003	1113	181aa	ENSP00000357591.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47468	Q5T215	NM_001139444.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356128.4	TRAPPC3L-002	2421	97aa	ENSP00000348445.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T215	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437098.1	TRAPPC3L-001	975	167aa	ENSP00000395769.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,421 bps, Translation length: 97 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5T215

Version

ENST00000356128.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000041951 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.