Transcript: ENST00000395963.2 CCR9-002

Description

chemokine (C-C motif) receptor 9 [Source:HGNC Symbol;Acc:1610]

Gene Synonyms

CC-CKR-9, CDw199, GPR-9-6, GPR28

Location

Chromosome 3: 45,928,001-45,944,666 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 33 domains and features, is associated with 7068 variant alleles and maps to 437 oligo probes.

Gene

This transcript is a product of gene ENSG00000173585.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357632.2	CCR9-001	2567	369aa	ENSP00000350256.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2732	P51686 Q9UN87	NM_031200.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395963.2	CCR9-002	2512	357aa	ENSP00000379292.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2733	P51686	NM_006641.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422395.1	CCR9-003	1331	107aa	ENSP00000393267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWC0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355983.2	CCR9-201	1331	357aa	ENSP00000348260.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2733	P51686	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463197.1	CCR9-004	349	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 2,512 bps, Translation length: 357 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51686

CCDS

This transcript is a member of the Human CCDS set: CCDS2733

Version

ENST00000395963.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257324 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000395963.2 CCR9-002

Summary