Transcript: ENST00000309285.3 XCR1-001

Description

chemokine (C motif) receptor 1 [Source:HGNC Symbol;Acc:1625]

Gene Synonyms

CCXCR1, GPR5

Location

About this transcript

This transcript has 2 exons, is annotated with 30 domains and features, is associated with 4538 variant alleles and maps to 369 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000309285.3	XCR1-001	5281	333aa	ENSP00000310405.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2736	P46094 Q689E2	NM_001024644.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542109.1	XCR1-201	1373	333aa	ENSP00000438119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2736	P46094 Q689E2	NM_005283.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395946.2	XCR1-002	332	36aa	ENSP00000379277.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q689E2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 5,281 bps, Translation length: 333 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P46094

CCDS

This transcript is a member of the Human CCDS set: CCDS2736

Version

ENST00000309285.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257322 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.