Transcript: ENST00000517558.1 TNFRSF10C-004

Description

tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain [Source:HGNC Symbol;Acc:11906]

Gene Synonyms

CD263, DCR1, DCR1-TNFR, DcR1, LIT, TRAIL-R3, TRAILR3, TRID

Location

Chromosome 8: 22,960,434-22,974,563 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 6946 variant alleles and maps to 425 oligo probes.

Gene

This transcript is a product of gene ENSG00000173535.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356864.3	TNFRSF10C-001	1718	259aa	ENSP00000349324.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6037	F5H6H7 O14798	NM_003841.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397703.2	TNFRSF10C-002	1242	155aa	ENSP00000380815.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PBT0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540813.1	TNFRSF10C-201	894	157aa	ENSP00000437612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6H7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517558.1	TNFRSF10C-004	894	67aa	ENSP00000428235.1	Nonsense mediated decay		E5RJI1	-	-
ENST00000520607.1	TNFRSF10C-003	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518135.1	TNFRSF10C-005	407	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 894 bps, Translation length: 67 residues

Version

ENST00000517558.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000375323 (version 3)

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Transcript: ENST00000517558.1 TNFRSF10C-004

Summary