Transcript: ENST00000310398.2 AGR3-001

Description

anterior gradient 3 [Source:HGNC Symbol;Acc:24167]

Gene Synonyms

AG3, BCMP11, HAG3, PDIA18, hAG-3

Location

About this transcript

This transcript has 8 exons, is annotated with 6 domains and features, is associated with 12084 variant alleles and maps to 320 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310398.2	AGR3-001	749	166aa	ENSP00000308606.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5365	Q8TD06	NM_176813.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402239.3	AGR3-004	563	163aa	ENSP00000386016.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MC62	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414935.1	AGR3-002	386	129aa	ENSP00000392818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000486448.1	AGR3-003	594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 749 bps, Translation length: 166 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TD06

CCDS

This transcript is a member of the Human CCDS set: CCDS5365

Version

ENST00000310398.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250191 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.