Transcript: ENST00000478201.1 TLR9-002

Description

TLR9 [Source:UniProtKB/TrEMBL;Acc:C3W5P5]

Location

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 2720 variant alleles and maps to 106 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000494383.1	TLR9-001	3695	1186aa	ENSP00000417517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C3W5P5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000478201.1	TLR9-002	570	55aa	ENSP00000419980.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 570 bps, Translation length: 55 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000478201.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000350202 (version 1)