Transcript: ENST00000404473.2 C10orf129-003

Description

chromosome 10 open reading frame 129 [Source:HGNC Symbol;Acc:31665]

Gene Synonyms

ACSM6, bA310E22.3

Location

About this transcript

This transcript has 10 exons, is associated with 12077 variant alleles and maps to 303 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000341686.3	C10orf129-201	1712	480aa	ENSP00000340296.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7440	Q6P461	NM_207321.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394005.3	C10orf129-001	1592	480aa	ENSP00000377573.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7440	Q6P461	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430183.1	C10orf129-202	1588	186aa	ENSP00000400368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6P461	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000327739.3	C10orf129-002	2307	141aa	ENSP00000328491.3	Nonsense mediated decay		H7BXS6	-	-
ENST00000404473.2	C10orf129-003	1336	85aa	ENSP00000384922.2	Nonsense mediated decay		H7BYZ2	-	-

Summary

Statistics

Exons: 10, Coding exons: 2, Transcript length: 1,336 bps, Translation length: 85 residues

Version

ENST00000404473.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000346853 (version 1)