Transcript: ENST00000502635.1 DCP2-008

Description

decapping mRNA 2 [Source:HGNC Symbol;Acc:24452]

Gene Synonyms

NUDT20

Location

Chromosome 5: 112,321,529-112,336,912 forward strand.

About this transcript

This transcript has 4 exons, is associated with 9095 variant alleles and maps to 188 oligo probes.

Gene

This transcript is a product of gene ENSG00000172795.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389063.2	DCP2-001	8947	420aa	ENSP00000373715.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34210	B7Z3U5 Q8IU60	NM_152624.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515408.1	DCP2-002	8029	385aa	ENSP00000425770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56377	Q8IU60	NM_001242377.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513585.1	DCP2-003	1572	402aa	ENSP00000424982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z3U5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000543319.1	DCP2-201	1500	209aa	ENSP00000439797.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z3U5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512751.1	DCP2-005	570	74aa	ENSP00000427198.1	Nonsense mediated decay		D6RCL0	-	-
ENST00000504961.1	DCP2-004	852	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508359.1	DCP2-006	838	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502635.1	DCP2-008	514	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510046.1	DCP2-007	369	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 514 bps,

Version

ENST00000502635.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000371799 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000502635.1 DCP2-008

Summary