Transcript: ENST00000393308.1 RAB43-003

Description

RAB43, member RAS oncogene family [Source:HGNC Symbol;Acc:19983]

Gene Synonyms

ISY1, RAB11B, RAB41

Location

Chromosome 3: 128,806,412-128,840,765 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 17 domains and features, is associated with 14301 variant alleles and maps to 438 oligo probes.

Gene

This transcript is a product of gene ENSG00000172780.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315150.5	RAB43-001	4467	212aa	ENSP00000319781.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33850	C9JFM7 Q86YS6	NM_198490.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393304.1	RAB43-002	4230	212aa	ENSP00000376981.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33850	C9JFM7 Q86YS6	NM_001204886.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393305.1	RAB43-004	4215	212aa	ENSP00000376982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33850	C9JFM7 Q86YS6	NM_001204883.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393307.1	RAB43-005	4203	212aa	ENSP00000376984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33850	C9JFM7 Q86YS6	NM_001204884.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393308.1	RAB43-003	4193	212aa	ENSP00000376985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33850	C9JFM7 Q86YS6	NM_001204885.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476465.1	RAB43-007	1627	155aa	ENSP00000427632.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56275	C9JFM7 E9PBQ0	NM_001204887.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457077.1	RAB43-006	574	86aa	ENSP00000390782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFM7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 4,193 bps, Translation length: 212 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86YS6

CCDS

This transcript is a member of the Human CCDS set: CCDS33850

Version

ENST00000393308.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000267851 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000393308.1 RAB43-003

Summary