Transcript: ENST00000378800.3 CCL19-003

Description

chemokine (C-C motif) ligand 19 [Source:HGNC Symbol;Acc:10617]

Gene Synonyms

CKb11, ELC, MIP-3b, MIP3B, SCYA19, exodus-3

Location

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 679 variant alleles and maps to 208 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311925.2	CCL19-001	687	98aa	ENSP00000308815.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6570	Q6IBD6 Q99731	NM_006274.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378800.3	CCL19-003	414	104aa	ENSP00000368077.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VZ75	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485502.1	CCL19-002	481	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 414 bps, Translation length: 104 residues

Version

ENST00000378800.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000052227 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.