Transcript: ENST00000311925.2 CCL19-001

Description

chemokine (C-C motif) ligand 19 [Source:HGNC Symbol;Acc:10617]

Gene Synonyms

CKb11, ELC, MIP-3b, MIP3B, SCYA19, exodus-3

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 833 variant alleles and maps to 303 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311925.2	CCL19-001	687	98aa	ENSP00000308815.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6570	Q6IBD6 Q99731	NM_006274.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378800.3	CCL19-003	414	104aa	ENSP00000368077.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VZ75	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485502.1	CCL19-002	481	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 687 bps, Translation length: 98 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99731

CCDS

This transcript is a member of the Human CCDS set: CCDS6570

Version

ENST00000311925.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000052225 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.