Transcript: ENST00000551243.1 RND1-003

Description

Rho family GTPase 1 [Source:HGNC Symbol;Acc:18314]

Gene Synonyms

ARHS, RHO6, RHOS, Rho6

Location

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 2242 variant alleles and maps to 134 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000309739.5	RND1-001	1681	232aa	ENSP00000308461.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8771	H0YHG7 Q92730	NM_014470.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550607.1	RND1-005	552	126aa	ENSP00000447059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YHG7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551243.1	RND1-003	793	96aa	ENSP00000449045.1	Nonsense mediated decay		F8VXU4	-	-
ENST00000548445.1	RND1-002	2136	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553260.1	RND1-004	482	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 793 bps, Translation length: 96 residues

Version

ENST00000551243.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000408918 (version 1)