Transcript: ENST00000472436.1 AGXT-003

Description

alanine-glyoxylate aminotransferase [Source:HGNC Symbol;Acc:341]

Gene Synonyms

AGT, AGT1, AGXT1, PH1, SPAT, SPT, TLH6

Location

About this transcript

This transcript has 5 exons, is associated with 3054 variant alleles and maps to 194 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307503.3	AGXT-001	1865	392aa	ENSP00000302620.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2543	P21549	NM_000030.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470255.1	AGXT-002	2638	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472436.1	AGXT-003	1034	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476698.1	AGXT-004	507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,034 bps,

Version

ENST00000472436.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000324432 (version 1)