Transcript: ENST00000325346.6 STARD5-002

Description

StAR-related lipid transfer (START) domain containing 5 [Source:HGNC Symbol;Acc:18065]

Gene Synonyms

MGC10327

Location

About this transcript

This transcript has 5 exons, is associated with 5112 variant alleles and maps to 309 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302824.6	STARD5-001	4871	213aa	ENSP00000304032.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10318	Q9NSY2	NM_181900.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000325346.6	STARD5-002	1264	63aa	ENSP00000317519.6	Nonsense mediated decay		Q9NSY2	-	-
ENST00000560156.1	STARD5-004	579	110aa	ENSP00000453368.1	Nonsense mediated decay		H0YLW4	-	-
ENST00000559913.1	STARD5-005	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560916.1	STARD5-006	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560723.1	STARD5-003	2683	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 1,264 bps, Translation length: 63 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NSY2

Version

ENST00000325346.6

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000417290 (version 1)