Transcript: ENST00000306821.3 NEGR1-002

Description

neuronal growth regulator 1 [Source:HGNC Symbol;Acc:17302]

Gene Synonyms

DMML2433, IGLON4, KILON, MGC46680, Ntra

Location

Chromosome 1: 71,868,627-72,566,613 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 14 domains and features, is associated with 313232 variant alleles and maps to 496 oligo probes.

Gene

This transcript is a product of gene ENSG00000172260.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357731.5	NEGR1-001	12811	354aa	ENSP00000350364.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS661	Q68DZ8 Q7Z3B1 Q8N440	NM_173808.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000306821.3	NEGR1-002	5577	226aa	ENSP00000305938.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68DZ8 Q8N440	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434200.1	NEGR1-201	927	308aa	ENSP00000413294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DI94 Q68DZ8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467479.1	NEGR1-004	726	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478526.1	NEGR1-003	428	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474357.1	NEGR1-005	192	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 5,577 bps, Translation length: 226 residues

Version

ENST00000306821.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000026723 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000306821.3 NEGR1-002

Summary