Transcript: ENST00000518918.1 MRPL13-005

Description

mitochondrial ribosomal protein L13 [Source:HGNC Symbol;Acc:14278]

Gene Synonyms

L13, L13A, L13mt, RPL13, RPML13

Location

Chromosome 8: 121,426,230-121,457,332 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 12277 variant alleles and maps to 237 oligo probes.

Gene

This transcript is a product of gene ENSG00000172172.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306185.3	MRPL13-001	1086	178aa	ENSP00000306548.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6332	E5RJI7 H0YAX3 Q9BYD1	NM_014078.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518918.1	MRPL13-005	633	147aa	ENSP00000430545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJI7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518696.1	MRPL13-003	1418	58aa	ENSP00000428867.1	Nonsense mediated decay		E5RFI2	-	-
ENST00000521648.1	MRPL13-007	703	47aa	ENSP00000428229.1	Nonsense mediated decay		H0YAX3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000523316.1	MRPL13-002	2368	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520677.1	MRPL13-004	500	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522717.1	MRPL13-006	480	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 633 bps, Translation length: 147 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000518918.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000381525 (version 1)

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Transcript: ENST00000518918.1 MRPL13-005

Summary