Transcript: ENST00000395601.3 SNTB1-001

Description

syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) [Source:HGNC Symbol;Acc:11168]

Gene Synonyms

59-DAP, A1B, BSYN2, DAPA1B, SNT2, SNT2B1, TIP-43

Location

About this transcript

This transcript has 8 exons, is annotated with 19 domains and features, is associated with 111794 variant alleles and maps to 690 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395601.3	SNTB1-001	5164	538aa	ENSP00000378965.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6334	E5RIX7 Q13884	NM_021021.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517992.1	SNTB1-002	2273	538aa	ENSP00000431124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6334	E5RIX7 Q13884	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520717.1	SNTB1-004	559	28aa	ENSP00000429292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIX7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519177.1	SNTB1-003	1962	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519298.1	SNTB1-005	414	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 5,164 bps, Translation length: 538 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13884

CCDS

This transcript is a member of the Human CCDS set: CCDS6334

Version

ENST00000395601.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000381535 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.