Transcript: ENST00000562305.1 CALB2-006

Description

calbindin 2 [Source:HGNC Symbol;Acc:1435]

Gene Synonyms

CAB29, CAL2, CR

Location

Chromosome 16: 71,392,697-71,423,729 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 19 domains and features, is associated with 15443 variant alleles and maps to 455 oligo probes.

Gene

This transcript is a product of gene ENSG00000172137.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302628.4	CALB2-001	1466	271aa	ENSP00000307508.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10899	P22676	NM_001740.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349553.5	CALB2-201	1373	192aa	ENSP00000340294.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NER6	NM_007088.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562305.1	CALB2-006	704	235aa	ENSP00000454639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000490520.1	CALB2-003	472	158aa	ENSP00000454467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000467817.1	CALB2-002	424	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 704 bps, Translation length: 235 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000562305.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000433790 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000562305.1 CALB2-006

Summary