Transcript: ENST00000315212.3 RNASEH1-001

Description

ribonuclease H1 [Source:HGNC Symbol;Acc:18466]

Gene Synonyms

H1RNA, RNH1

Location

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 7189 variant alleles and maps to 439 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315212.3	RNASEH1-001	1887	286aa	ENSP00000313350.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1647	B3KUD4 E5KN15 F8WD93 O60930	NM_002936.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000436842.1	RNASEH1-002	2120	43aa	ENSP00000404926.1	Nonsense mediated decay		F8WD93	-	-
ENST00000454734.1	RNASEH1-003	749	43aa	ENSP00000411646.1	Nonsense mediated decay		F8WBP0	-	-
ENST00000464986.1	RNASEH1-004	514	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,887 bps, Translation length: 286 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60930

CCDS

This transcript is a member of the Human CCDS set: CCDS1647

Version

ENST00000315212.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000206605 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.