Transcript: ENST00000254043.3 KRT15-001

Description

keratin 15 [Source:HGNC Symbol;Acc:6421]

Gene Synonyms

CK15, K15, K1CO, KRTB

Location

Chromosome 17: 39,669,995-39,678,665 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 20 domains and features, is associated with 4728 variant alleles and maps to 972 oligo probes.

Gene

This transcript is a product of gene ENSG00000171346.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254043.3	KRT15-001	5237	456aa	ENSP00000254043.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11398	P19012	NM_002275.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393974.3	KRT15-004	3758	291aa	ENSP00000377544.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MT21 B3KRA2 C9JTG5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393981.3	KRT15-201	2527	251aa	ENSP00000377550.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KRA2 C9JTG5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393976.2	KRT15-007	2394	456aa	ENSP00000377546.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11398	P19012	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458290.1	KRT15-006	903	220aa	ENSP00000409282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTG5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497016.1	KRT15-002	959	81aa	ENSP00000466687.1	Nonsense mediated decay		K7EMX0	-	-
ENST00000470004.1	KRT15-003	780	49aa	ENSP00000467875.1	Nonsense mediated decay		K7EQK9	-	-
ENST00000474031.1	KRT15-008	2614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463447.1	KRT15-005	877	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586794.1	KRT15-009	470	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 5,237 bps, Translation length: 456 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P19012

CCDS

This transcript is a member of the Human CCDS set: CCDS11398

Version

ENST00000254043.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257301 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000254043.3 KRT15-001

Summary