Transcript: ENST00000518262.1 ESCO2-006

Description

establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:HGNC Symbol;Acc:27230]

Gene Synonyms

2410004I17Rik, EFO2, RBS

Location

Chromosome 8: 27,637,716-27,657,118 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 8351 variant alleles and maps to 166 oligo probes.

Gene

This transcript is a product of gene ENSG00000171320.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000305188.8	ESCO2-001	3922	601aa	ENSP00000306999.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34872	E5RFP7 E5RIE3 Q56NI9	NM_001017420.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397418.2	ESCO2-201	2487	239aa	ENSP00000380563.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q49AP4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523566.1	ESCO2-004	698	187aa	ENSP00000428435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFP7 E5RIE3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519637.1	ESCO2-005	574	133aa	ENSP00000428027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFP7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518262.1	ESCO2-006	528	176aa	ENSP00000428959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000522378.1	ESCO2-002	2503	290aa	ENSP00000428928.1	Nonsense mediated decay		E5RFE4 E5RFP7 E5RIE3	-	-
ENST00000523910.1	ESCO2-007	691	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524293.1	ESCO2-003	3805	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 528 bps, Translation length: 176 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000518262.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000376281 (version 1)

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Transcript: ENST00000518262.1 ESCO2-006

Summary