Transcript: ENST00000572080.1 GAA-008

Description

glucosidase, alpha; acid [Source:HGNC Symbol;Acc:4065]

Gene Synonyms

LYAG

Location

Chromosome 17: 78,084,801-78,090,881 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 3563 variant alleles and maps to 138 oligo probes.

Gene

This transcript is a product of gene ENSG00000171298.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302262.3	GAA-002	3626	952aa	ENSP00000305692.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32760	I3L0S5 I3L3L3 P10253	NM_000152.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000390015.3	GAA-001	3549	952aa	ENSP00000374665.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32760	I3L0S5 I3L3L3 P10253	NM_001079804.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000570803.1	GAA-005	956	284aa	ENSP00000460543.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0S5 I3L3L3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000577106.1	GAA-004	812	208aa	ENSP00000458306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0S5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000572080.1	GAA-008	723	93aa	ENSP00000459972.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000574376.1	GAA-003	952	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000573556.1	GAA-009	756	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000572803.1	GAA-006	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570716.1	GAA-007	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 723 bps, Translation length: 93 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000572080.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000437442 (version 1)

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Transcript: ENST00000572080.1 GAA-008

Summary