Transcript: ENST00000305352.6 S1PR1-001

Description

sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:3165]

Gene Synonyms

CD363, CHEDG1, D1S3362, ECGF1, EDG-1, EDG1, S1P1, edg-1

Location

About this transcript

This transcript has 2 exons, is annotated with 38 domains and features, is associated with 2536 variant alleles and maps to 439 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000305352.6	S1PR1-001	2909	382aa	ENSP00000305416.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS777	P21453 Q7L853	NM_001400.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000475821.1	S1PR1-003	763	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475289.1	S1PR1-002	505	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 2,909 bps, Translation length: 382 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P21453

CCDS

This transcript is a member of the Human CCDS set: CCDS777

Version

ENST00000305352.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000029908 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.