Transcript: ENST00000522671.1 SDR16C5-002

Description

short chain dehydrogenase/reductase family 16C, member 5 [Source:HGNC Symbol;Acc:30311]

Gene Synonyms

RDH#2, RDH-E2, RDHE2

Location

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 8946 variant alleles and maps to 333 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303749.3	SDR16C5-001	1840	309aa	ENSP00000307607.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6167	Q8N3Y7	NM_138969.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396721.2	SDR16C5-003	2399	265aa	ENSP00000379947.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N3Y7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522671.1	SDR16C5-002	1988	318aa	ENSP00000431010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V145	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 1,988 bps, Translation length: 318 residues

Version

ENST00000522671.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000378236 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.