Transcript: ENST00000396721.2 SDR16C5-003

Description

short chain dehydrogenase/reductase family 16C, member 5 [Source:HGNC Symbol;Acc:30311]

Gene Synonyms

RDH#2, RDH-E2, RDHE2

Location

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 9162 variant alleles and maps to 414 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303749.3	SDR16C5-001	1840	309aa	ENSP00000307607.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6167	Q8N3Y7	NM_138969.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396721.2	SDR16C5-003	2399	265aa	ENSP00000379947.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N3Y7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522671.1	SDR16C5-002	1988	318aa	ENSP00000431010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V145	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,399 bps, Translation length: 265 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N3Y7

Version

ENST00000396721.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000378234 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.