Transcript: ENST00000559391.1 AKAP13-022

Description

A kinase (PRKA) anchor protein 13 [Source:HGNC Symbol;Acc:371]

Gene Synonyms

AKAP-13, AKAP-Lbc, ARHGEF13, BRX, HA-3, HT31, Ht31, LBC, PRKA13, PROTO-LB, PROTO-LBC, c-lbc, p47

Location

Chromosome 15: 86,278,830-86,283,793 forward strand.

About this transcript

This transcript has 3 exons, is associated with 2594 variant alleles and maps to 116 oligo probes.

Gene

This transcript is a product of gene ENSG00000170776.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361243.2	AKAP13-001	9468	2817aa	ENSP00000354718.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32320	A8MYJ1 H0YMI5 Q12802	NM_006738.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394518.2	AKAP13-004	13215	2813aa	ENSP00000378026.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32319	A8MYJ1 H0YMI5 Q12802	NM_007200.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394510.2	AKAP13-201	8081	1058aa	ENSP00000378018.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MYJ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559362.1	AKAP13-002	5459	1745aa	ENSP00000453768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMI5 H0YMW2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560302.1	AKAP13-003	3765	179aa	ENSP00000453634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMI5 Q12802	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559486.1	AKAP13-012	827	275aa	ENSP00000453205.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLH1	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000558166.1	AKAP13-009	558	186aa	ENSP00000452622.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK18	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000558811.1	AKAP13-010	447	149aa	ENSP00000452698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000560256.1	AKAP13-006	322	38aa	ENSP00000453620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMI5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560579.1	AKAP13-008	4290	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560676.1	AKAP13-007	3297	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560571.1	AKAP13-005	712	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557852.1	AKAP13-015	660	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558092.1	AKAP13-014	620	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560185.1	AKAP13-021	611	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561337.1	AKAP13-020	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560340.1	AKAP13-011	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559820.1	AKAP13-018	322	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558644.1	AKAP13-023	1403	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560957.1	AKAP13-013	751	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560482.1	AKAP13-016	683	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559278.1	AKAP13-017	441	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558009.1	AKAP13-019	427	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559391.1	AKAP13-022	418	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 418 bps,

Version

ENST00000559391.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417337 (version 1)

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Transcript: ENST00000559391.1 AKAP13-022

Summary