Transcript: ENST00000416950.1 TTLL6-002

Description

tubulin tyrosine ligase-like family, member 6 [Source:HGNC Symbol;Acc:26664]

Gene Synonyms

FLJ35808, TTL.6

Location

Chromosome 17: 46,839,603-46,871,696 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 13574 variant alleles and maps to 284 oligo probes.

Gene

This transcript is a product of gene ENSG00000170703.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393382.3	TTLL6-003	3551	891aa	ENSP00000377043.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45724	C9JMG1 D3DTW0 Q8N841	NM_001130918.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433608.2	TTLL6-001	2548	584aa	ENSP00000399211.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11537	F8W9N0 Q8N841	NM_173623.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376681.3	TTLL6-005	3371	185aa	ENSP00000365871.4	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000416950.1	TTLL6-002	1928	208aa	ENSP00000415138.1	Nonsense mediated decay		F8W9N0	-	-
ENST00000456415.1	TTLL6-006	580	48aa	ENSP00000414290.1	Nonsense mediated decay		F6QD81	-	-
ENST00000424018.1	TTLL6-008	543	27aa	ENSP00000400624.1	Nonsense mediated decay		F8W896	-	-
ENST00000470462.2	TTLL6-007	479	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490027.1	TTLL6-004	4440	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509809.1	TTLL6-010	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 4, Transcript length: 1,928 bps, Translation length: 208 residues

Version

ENST00000416950.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000346938 (version 2)

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Transcript: ENST00000416950.1 TTLL6-002

Summary