Transcript: ENST00000552528.1 PA2G4-006

Description

proliferation-associated 2G4, 38kDa [Source:HGNC Symbol;Acc:8550]

Gene Synonyms

EBP1, HG4-1, p38-2G4

Location

Chromosome 12: 56,503,653-56,504,404 forward strand.

About this transcript

This transcript has 2 exons, is associated with 337 variant alleles and maps to 150 oligo probes.

Gene

This transcript is a product of gene ENSG00000170515.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303305.6	PA2G4-001	2577	394aa	ENSP00000302886.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8902	A8K6Y1 F8VZ69 Q6PIN5 Q9UQ80	NM_006191.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552766.1	PA2G4-010	1085	284aa	ENSP00000448557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VR77 F8VZ69	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551061.1	PA2G4-009	694	64aa	ENSP00000447389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VZ69	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000553057.1	PA2G4-008	687	187aa	ENSP00000447615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VZ69 F8W0A3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000552266.1	PA2G4-005	779	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000550166.1	PA2G4-007	520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552528.1	PA2G4-006	289	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 289 bps,

Version

ENST00000552528.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407773 (version 1)

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Transcript: ENST00000552528.1 PA2G4-006

Summary