Transcript: ENST00000550829.1 KRT72-003

Description

keratin 72 [Source:HGNC Symbol;Acc:28932]

Gene Synonyms

K6IRS2, K6irs, KB35, KRT6, KRT6IRS2

Location

Chromosome 12: 52,979,742-52,995,216 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 3 domains and features, is associated with 7275 variant alleles and maps to 355 oligo probes.

Gene

This transcript is a product of gene ENSG00000170486.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000293745.2	KRT72-201	2015	511aa	ENSP00000293745.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8833	B4DXK4 Q14CN4	NM_080747.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537672.2	KRT72-001	1813	511aa	ENSP00000441160.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8833	B4DXK4 Q14CN4	NM_001146225.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354310.4	KRT72-002	1764	469aa	ENSP00000346269.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53795	Q14CN4	NM_001146226.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398066.3	KRT72-202	1679	323aa	ENSP00000446151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DXK4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549979.1	KRT72-004	574	192aa	ENSP00000449324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000550829.1	KRT72-003	1679	143aa	ENSP00000446881.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 2, Transcript length: 1,679 bps, Translation length: 143 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000550829.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000405695 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000550829.1 KRT72-003

Summary