Transcript: ENST00000546299.1 DENND5B-004

Description

DENN/MADD domain containing 5B [Source:HGNC Symbol;Acc:28338]

Gene Synonyms

MGC24039

Location

Chromosome 12: 31,604,636-31,648,836 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 19311 variant alleles and maps to 293 oligo probes.

Gene

This transcript is a product of gene ENSG00000170456.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389082.5	DENND5B-001	9470	1274aa	ENSP00000373734.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44857	Q6ZUT9	NM_144973.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000306833.6	DENND5B-201	9310	1309aa	ENSP00000306482.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1S3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536562.1	DENND5B-003	4291	1309aa	ENSP00000444889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1S3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354285.4	DENND5B-002	3132	738aa	ENSP00000346238.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZUT9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546299.1	DENND5B-004	1723	537aa	ENSP00000442938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YGE5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000544698.1	DENND5B-006	643	63aa	ENSP00000445113.1	Nonsense mediated decay		F5H4A0	-	-
ENST00000545147.1	DENND5B-007	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537061.1	DENND5B-008	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,723 bps, Translation length: 537 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000546299.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402045 (version 1)

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Transcript: ENST00000546299.1 DENND5B-004

Summary