Transcript: ENST00000551581.1 KRT78-004

Description

keratin 78 [Source:HGNC Symbol;Acc:28926]

Gene Synonyms

K5B, KB40, Kb40

Location

Chromosome 12: 53,239,780-53,241,737 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 909 variant alleles and maps to 77 oligo probes.

Gene

This transcript is a product of gene ENSG00000170423.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000304620.4	KRT78-001	1778	520aa	ENSP00000306261.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8840	B4DQ49 F8VS93 Q8N1N4	NM_173352.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359499.4	KRT78-002	2554	410aa	ENSP00000352479.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQ49 F8VS93 Q8N1N4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547110.1	KRT78-003	624	63aa	ENSP00000447817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VS93	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547920.1	KRT78-005	458	103aa	ENSP00000448562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551581.1	KRT78-004	405	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 405 bps,

Version

ENST00000551581.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000406383 (version 1)

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Transcript: ENST00000551581.1 KRT78-004

Summary